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# DOI Title Journal Date Cited/self/% Refs/self/% IRB Funding Notes
1 10.1007/s00203-020-01834-x Gorillibacterium Timonense Sp. Nov., Isolated From An Obese Patient Archives of Microbiology 2020-02-26 1/1/100% 21/13/62% 09-022 ANR 10-IAHU-03
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2 10.1007/s00203-021-02493-2 Gemella Massiliensis Sp. Nov., A New Bacterium Isolated From The Human Sputum Archives of Microbiology 2021-08-21 1/0/0% 17/4/24% 09-022 ANR 10-IAHU-03
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3 10.1007/s00246-017-1723-5 First Case Of Q Fever Endocarditis Involving The Melody® Transcatheter Pulmonary Valve In An Afebrile Child Pediatric Cardiology 2017-09-25 3/1/33% 5/2/40%
4 10.1007/s10096-013-1900-2 Culturomics Identified 11 New Bacterial Species From A Single Anorexia Nervosa Stool Sample European journal of clinical microbiology & infectious diseases 2013-06-02 146/31/21% 41/22/54% 09-022
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5 10.1007/s10096-017-3047-z Bartonella henselae is usually not viable in lymph nodes of patients with cat scratch disease European journal of clinical microbiology & infectious diseases 2017-07-02
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6 10.1007/s10096-018-3238-2 Molecular strategy for the diagnosis of infectious lymphadenitis European journal of clinical microbiology & infectious diseases 2018-03-29
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7 10.1007/s10096-020-03889-6 Epidemiological Serosurvey Of Vector-Borne And Zoonotic Pathogens Among Homeless People Living In Shelters In Marseille: Cross-Sectional One-Day Surveys (2005-2015) European journal of clinical microbiology & infectious diseases 2020-04-21 7/0/0% 32/14/44% 2010-A01406-33
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8 10.1007/s10096-020-04018-z Gastrointestinal Symptoms And The Acquisition Of Enteric Pathogens In Hajj Pilgrims: A 3-Year Prospective Cohort Study European journal of clinical microbiology & infectious diseases 2020-09-11 9/4/44% 37/15/41% 2013-A00961-44
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9 10.1007/s10096-020-04122-0 Acquisition Of Multidrug-Resistant Bacteria And Encoding Genes Among French Pilgrims During The 2017 And 2018 Hajj European journal of clinical microbiology & infectious diseases 2021-01-07 7/1/14% 49/19/39% 2013-A00961-44
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10 10.1007/s10096-020-04127-9 Variations In Respiratory Pathogen Carriage Among A Homeless Population In A Shelter For Men In Marseille, France, March–July 2020: Cross-Sectional 1-Day Surveys European journal of clinical microbiology & infectious diseases 2021-02-13 7/1/14% 15/7/47% 2010-A01406-33
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11 10.1016/j.cmi.2016.07.005 Tropheryma Whipplei Associated With Diarrhoea In Young Children Clinical microbiology and infection 2016-10 19/3/16% 30/15/50% 13–028 Crédit Ministériel ‘Programme Hospitalier de Recherche Clinique’ 2009
Retrospective approval : Samples obtained on 2009 and Approval on 2013
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12 10.1016/j.ijantimicag.2020.105949 Hydroxychloroquine And Azithromycin As A Treatment Of COVID-19: Results Of An Open-Label Non-Randomized Clinical Trial International Journal of Antimicrobial Agents 2020-07 3721/43/1% 20/7/35% 2020-000890-25
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13 10.1016/j.ijid.2020.08.075 Risk Factors For Symptoms Of Infection And Microbial Carriage Among French Medical Students Abroad International Journal of infectious Diseases 2020-11 11/5/45% 24/6/25% 2019-006
Retrospective approval : Samples obtained on 2017 and Approval on 2019-08-07
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14 10.1038/ijo.2011.153 Obesity-associated Gut Microbiota Is Enriched In Lactobacillus Reuteri And Depleted In Bifidobacterium Animalis And Methanobrevibacter Smithii International Journal of Obesity 2011-08-09 504/24/5% 59/6/10% 10-002
Retrospective approval : Samples obtained on 2008 and Approval on 2010
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15 10.1038/ijo.2013.20 Correlation Between Body Mass Index And Gut Concentrations Of Lactobacillus Reuteri, Bifidobacterium Animalis, Methanobrevibacter Smithii And Escherichia Coli International Journal of Obesity 2013-03-05 271/16/6% 40/7/18% 10-002
Retrospective approval : Samples obtained on 2008 and Approval on 2010
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16 10.1038/nmicrobiol.2016.203 Culture Of Previously Uncultured Members Of The Human Gut Microbiota By Culturomics Nature Microbiology 2016-11-07 677/213/31% 40/21/53% 09-022
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17 10.1038/s41366-018-0201-3 Salt In Stools Is Associated With Obesity, Gut Halophilic Microbiota And Akkermansia Muciniphila Depletion In Humans International Journal of Obesity 2018-09-11 45/4/9% 48/12/25% 09-022 ANR 10-IAHU-03
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18 10.1038/s41598-017-17132-4 Culturomics And Amplicon-based Metagenomic Approaches For The Study Of Fungal Population In Human Gut Microbiota Scientific Reports 2017-12 63/6/10% 59/13/22% 2016-011
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19 10.1038/s41598-019-45611-3 Gut Microbiota Alteration Is Characterized By A Proteobacteria And Fusobacteria Bloom In Kwashiorkor And A Bacteroidetes Paucity In Marasmus Scientific Reports 2019-06-24 37/12/32% 54/10/19% 09-022 ANR 10-IAHU-03
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20 10.1038/s41598-020-58969-6 Dramatic HIV DNA Degradation Associated With Spontaneous HIV Suppression And Disease-Free Outcome In A Young Seropositive Woman Following Her Infection Scientific Reports 2020-02-13 2/1/50% 25/5/20% ANR 10-IAHU-03
21 10.1038/srep26051 Increased Gut Redox And Depletion Of Anaerobic And Methanogenic Prokaryotes In Severe Acute Malnutrition Scientific Reports 2016-05 146/51/35% 55/5/9% 09-022 Fondation Méditerranée Infection
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22 10.1128/AAC.01969-13 Vitamin D And Prolonged Treatment With Photosensitivity-Associated Antibiotics Antimicrobial Agents And Chemotherapy 2013-12 4/2/50% 14/3/21% 10-002
Retrospective approval : Samples obtained on 2008 and Approval on 2010
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23 10.1128/AAC.02437-14 Abnormal Weight Gain And Gut Microbiota Modifications Are Side Effects Of Long-Term Doxycycline And Hydroxychloroquine Treatment Antimicrobial Agents And Chemotherapy 2014-06 79/0/0% 37/0/0% 10-002 French National Referral Center for Q Fever
Retrospective approval : Samples obtained on 2008 and Approval on 2010
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24 10.1128/JCM.00517-19 Passive Filtration, Rapid Scanning Electron Microscopy, And Matrix-Assisted Laser Desorption Ionization-Time Of Flight Mass Spectrometry For Treponema Culture And Identification From The Oral Cavity Journal of Clinical Microbiology 2019-10 14/8/57% 37/5/14% 2016-010 ANR 10-IAHU-03
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25 10.1128/jcm.00542-18 Fluorescence In Situ Hybridization (FISH) and Peptide Nucleic Acid Probe-Based FISH for Diagnosis of Q Fever Endocarditis and Vascular Infections Journal of Clinical Microbiology 2018-09 22/6/27% 39/18/46% 2016-025 ANR 10-IAHU-03
Retrospective approval : Samples obtained on 2014 and Approval on 2016-10-19
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26 10.1128/jcm.01663-17 Clostridium Scindens Is Present In The Gut Microbiota During Clostridium Difficile Infection: A Metagenomic And Culturomic Analysis Journal of Clinical Microbiology 2018-05 15/1/7% 7/1/14% 2016-011 ANR 10-IAHU-03
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27 10.1128/JCM.02068-15 High Prevalence Of Mycoplasma Faucium DNA In The Human Oropharynx Journal of Clinical Microbiology 2016-01 5/0/0% 11/4/36% 2013-A00961-44 Mediterranean Infection Foundation
Retrospective approval : Samples obtained on 2013-01 to 2014-12 and Approval on 2013
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28 10.1186/s12866-017-1104-5 A Modified Multilocus Sequence Typing Protocol To Genotype Kingella Kingae From Oropharyngeal Swabs Without Bacterial Isolation BMC microbiology 2017-09-21 10/6/60% 12/12/100% 2016-024
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29 10.1186/s12866-018-1304-7 Repertoire Of The Gut Microbiota From Stomach To Colon Using Culturomics And Next-Generation Sequencing BMC microbiology 2018-10-24 54/4/7% 60/23/38% 2016-010 ANR 10-IAHU-03
Retrospective approval : Samples obtained on 2016-02 to 2016-06 and Approval on 2016-09-21
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30 10.1186/s12936-016-1469-1 Malaria In Urban, Semi-Urban And Rural Areas Of Southern Of Gabon: Comparison Of The Pfmdr 1 And Pfcrt Genotypes From Symptomatic Children Malaria Journal 2016-08-18 28/14/50% 46/4/9%
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31 10.1186/s13062-015-0041-1 Whole-genome Assembly Of Akkermansia Muciniphila Sequenced Directly From Human Stool Biology Direct 2015-02-19 28/4/14% 39/10/26% 09-022
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32 10.1186/s40793-016-0150-1 High-quality Draft Genome Sequence And Description Of Haemophilus Massiliensis Sp. Nov. Standards in genomic sciences 2016-04-14 44/24/55% 39/4/10% Mediterranée Infection Foundation
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33 10.1371/journal.pone.0037804 Evidence For An African Cluster Of Human Head And Body Lice With Variable Colors And Interbreeding Of Lice Between Continents Plos One 2012-05-25 24/13/54% 22/7/32%
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34 10.1371/journal.pone.0045903 Evidence That Head And Body Lice On Homeless Persons Have The Same Genotype Plos One 2012-09-26 22/7/32% 31/12/39% 2010-A01406-33
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35 10.1371/journal.pone.0051340 Cytomegalovirus And Herpes Simplex Virus Effect On The Prognosis Of Mechanically Ventilated Patients Suspected To Have Ventilator-Associated Pneumonia Plos One 2012-12-07 82/13/16% 52/6/12% PHRC 2006
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36 10.1371/journal.pone.0054679 Molecular Evidence For The Presence Of Rickettsia Felis In The Feces Of Wild-living African Apes Plos One 2013-02-06 32/9/28% 28/0/0%
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37 10.1371/journal.pone.0084033 Development And Validation Of A Microarray For The Investigation Of The CAZymes Encoded By The Human Gut Microbiome Plos One 2013-12-31 34/4/12% 44/9/20% 10-002 Mediterranean Infection Foundation
Retrospective approval : Samples obtained on 2008 and Approval on 2010
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38 10.1371/journal.ppat.1003827 A Toxin-Antitoxin Module Of Salmonella Promotes Virulence In Mice PLOS Pathogens 2013-12-19 94/1/1% 58/7/12% ANR 09-BLAN-0296-01
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